ProteoWizard
SpectrumList_LockmassRefiner.hpp
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1 //
2 // $Id: SpectrumList_LockmassRefiner.hpp 9095 2015-11-01 01:14:24Z pcbrefugee $
3 //
4 //
5 // Original author: Matt Chambers <matt.chambers <a.t> vanderbilt.edu>
6 //
7 // Copyright 2008 Vanderbilt University - Nashville, TN 37232
8 //
9 // Licensed under the Apache License, Version 2.0 (the "License");
10 // you may not use this file except in compliance with the License.
11 // You may obtain a copy of the License at
12 //
13 // http://www.apache.org/licenses/LICENSE-2.0
14 //
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18 // See the License for the specific language governing permissions and
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21 
22 
23 #ifndef _SPECTRUMLIST_LOCKMASSREFINER_HPP_
24 #define _SPECTRUMLIST_LOCKMASSREFINER_HPP_
25 
26 
29 
30 
31 namespace pwiz {
32 namespace analysis {
33 
34 
35 /// SpectrumList implementation to replace peak profiles with picked peaks
37 {
38  public:
39 
40  SpectrumList_LockmassRefiner(const msdata::SpectrumListPtr& inner, double lockmassMzPosScans, double lockmassMzNegScans, double lockmassTolerance);
41 
42 
43  static bool accept(const msdata::SpectrumListPtr& inner);
44 
45  virtual msdata::SpectrumPtr spectrum(size_t index, msdata::DetailLevel detailLevel) const;
46  virtual msdata::SpectrumPtr spectrum(size_t index, bool getBinaryData = false) const;
47 
48  private:
49  double mzPositiveScans_, mzNegativeScans_, tolerance_;
50 };
51 
52 
53 } // namespace analysis
54 } // namespace pwiz
55 
56 
57 #endif // _SPECTRUMLIST_LOCKMASSREFINER_HPP_
boost::shared_ptr< Spectrum > SpectrumPtr
Definition: MSData.hpp:569
SpectrumList implementation to replace peak profiles with picked peaks.
Inheritable pass-through implementation for wrapping a SpectrumList.
boost::shared_ptr< SpectrumList > SpectrumListPtr
Definition: MSData.hpp:707
#define PWIZ_API_DECL
Definition: Export.hpp:32