accept(const msdata::SpectrumListPtr &inner) | pwiz::analysis::SpectrumList_ChargeStateCalculator | inlinestatic |
dataProcessingPtr() const | pwiz::msdata::SpectrumListWrapper | inlinevirtual |
dp_ | pwiz::msdata::SpectrumListWrapper | protected |
empty() const | pwiz::msdata::SpectrumListWrapper | inlinevirtual |
find(const std::string &id) const | pwiz::msdata::SpectrumList | virtual |
findAbbreviated(const std::string &abbreviatedId, char delimiter='.') const | pwiz::msdata::SpectrumList | virtual |
findNameValue(const std::string &name, const std::string &value) const | pwiz::msdata::SpectrumList | virtual |
findSpotID(const std::string &spotID) const | pwiz::msdata::SpectrumList | virtual |
fraction_ | pwiz::analysis::SpectrumList_ChargeStateCalculator | private |
inner() const | pwiz::msdata::SpectrumListWrapper | inline |
inner_ | pwiz::msdata::SpectrumListWrapper | protected |
innermost() const | pwiz::msdata::SpectrumListWrapper | inline |
makeMS2_ | pwiz::analysis::SpectrumList_ChargeStateCalculator | private |
maxCharge_ | pwiz::analysis::SpectrumList_ChargeStateCalculator | private |
maxKnownCharge_ | pwiz::analysis::SpectrumList_ChargeStateCalculator | private |
minCharge_ | pwiz::analysis::SpectrumList_ChargeStateCalculator | private |
override_ | pwiz::analysis::SpectrumList_ChargeStateCalculator | private |
size() const | pwiz::msdata::SpectrumListWrapper | inlinevirtual |
spectrum(size_t index, bool getBinaryData=true) const | pwiz::analysis::SpectrumList_ChargeStateCalculator | virtual |
pwiz::msdata::SpectrumListWrapper::spectrum(size_t index, DetailLevel detailLevel) const | pwiz::msdata::SpectrumListWrapper | inlinevirtual |
pwiz::msdata::SpectrumList::spectrum(const SpectrumPtr &seed, bool getBinaryData) const | pwiz::msdata::SpectrumList | virtual |
spectrumIdentity(size_t index) const | pwiz::msdata::SpectrumListWrapper | inlinevirtual |
SpectrumList_ChargeStateCalculator(const msdata::SpectrumListPtr &inner, bool overrideExistingChargeState=true, int maxMultipleCharge=3, int minMultipleCharge=2, double intensityFractionBelowPrecursorForSinglyCharged=0.9, int maxKnownCharge=0, bool makeMS2=false) | pwiz::analysis::SpectrumList_ChargeStateCalculator | |
SpectrumListWrapper(const SpectrumListPtr &inner) | pwiz::msdata::SpectrumListWrapper | inline |
warn_once(const char *msg) const | pwiz::msdata::SpectrumList | virtual |
~SpectrumList() | pwiz::msdata::SpectrumList | inlinevirtual |