ProteoWizard
pwiz::analysis::SpectrumList_ChargeFromIsotope Member List

This is the complete list of members for pwiz::analysis::SpectrumList_ChargeFromIsotope, including all inherited members.

dataProcessingPtr() constpwiz::msdata::SpectrumListWrapperinlinevirtual
defaultChargeMax_pwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
defaultChargeMin_pwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
defaultIsolationWidth_pwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
dp_pwiz::msdata::SpectrumListWrapperprotected
empty() constpwiz::msdata::SpectrumListWrapperinlinevirtual
find(const std::string &id) constpwiz::msdata::SpectrumListvirtual
findAbbreviated(const std::string &abbreviatedId, char delimiter='.') constpwiz::msdata::SpectrumListvirtual
findNameValue(const std::string &name, const std::string &value) constpwiz::msdata::SpectrumListvirtual
findSpotID(const std::string &spotID) constpwiz::msdata::SpectrumListvirtual
getMS1RetentionTimes()pwiz::analysis::SpectrumList_ChargeFromIsotope
getParentIndices(const SpectrumPtr, std::vector< int > &) constpwiz::analysis::SpectrumList_ChargeFromIsotope
getParentPeaks(const SpectrumPtr, const std::vector< int > &, const double, const double, const double, std::vector< std::vector< double > > &, std::vector< std::vector< double > > &) constpwiz::analysis::SpectrumList_ChargeFromIsotope
inner() constpwiz::msdata::SpectrumListWrapperinline
inner_pwiz::msdata::SpectrumListWrapperprotected
innermost() constpwiz::msdata::SpectrumListWrapperinline
instantiatePeakPicker(const std::vector< int > &) constpwiz::analysis::SpectrumList_ChargeFromIsotope
instantiatePeakPicker(const std::vector< int > &, const double, const double, const double) constpwiz::analysis::SpectrumList_ChargeFromIsotope
massNeutronpwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
maxCharge_pwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
maxIsotopePeakspwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
maxNumberPeakspwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
minCharge_pwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
minIsotopePeakspwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
minNumberPeakspwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
MS1retentionTimespwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
mzTolpwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
nChainsCheck_pwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
nSamplespwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
override_pwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
parentsAfter_pwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
parentsBefore_pwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
sigVal_pwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
simulatedIntensityRankSumpwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
simulatedKLspwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
simulatedSSEspwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
simulateKL(const double, const int, const int)pwiz::analysis::SpectrumList_ChargeFromIsotope
simulateSSE(const int, const int)pwiz::analysis::SpectrumList_ChargeFromIsotope
simulateTotIntensity(const int)pwiz::analysis::SpectrumList_ChargeFromIsotope
size() constpwiz::msdata::SpectrumListWrapperinlinevirtual
spectrum(size_t index, bool getBinaryData=true) constpwiz::analysis::SpectrumList_ChargeFromIsotopevirtual
pwiz::msdata::SpectrumListWrapper::spectrum(size_t index, DetailLevel detailLevel) constpwiz::msdata::SpectrumListWrapperinlinevirtual
pwiz::msdata::SpectrumList::spectrum(const SpectrumPtr &seed, bool getBinaryData) constpwiz::msdata::SpectrumListvirtual
spectrumIdentity(size_t index) constpwiz::msdata::SpectrumListWrapperinlinevirtual
SpectrumList_ChargeFromIsotope(const msdata::MSData &msd, int maxCharge=3, int minCharge=1, int parentsBefore=2, int parentsAfter=0, double isolationWindow=1.25, int defaultChargeMax=0, int defaultChargeMin=0)pwiz::analysis::SpectrumList_ChargeFromIsotope
SpectrumListWrapper(const SpectrumListPtr &inner)pwiz::msdata::SpectrumListWrapperinline
upperLimitPaddingpwiz::analysis::SpectrumList_ChargeFromIsotopeprivate
warn_once(const char *msg) constpwiz::msdata::SpectrumListvirtual
~SpectrumList()pwiz::msdata::SpectrumListinlinevirtual