- m -
- m_block
: CSHA1
- m_buffer
: CSHA1
- m_by
: ralab::base::base::utilities::SeqMinus< TReal >
, ralab::base::base::utilities::SeqPlus< TReal >
- m_count
: CSHA1
- m_digest
: CSHA1
- m_from
: ralab::base::base::utilities::SeqMinus< TReal >
, ralab::base::base::utilities::SeqPlus< TReal >
- m_ions
: pwiz::analysis::PepxmlRecordReader::record
- m_itr
: pwiz::util::CharIndexedVectorConstIterator< T >
, pwiz::util::CharIndexedVectorIterator< T >
- m_reserved0
: CSHA1
- m_reserved1
: CSHA1
- m_state
: CSHA1
- m_workspace
: CSHA1
- magnitude
: TestDatum
- makeMS2_
: pwiz::analysis::SpectrumList_ChargeStateCalculator
- managemem
: pwiz::minimxml::SAXParser::Handler::Attributes
- mass
: pwiz::chemistry::detail::Isotope
, pwiz::chemistry::MassAbundance
, pwiz::data::pepxml::AminoAcidModification
, pwiz::data::pepxml::ModAminoAcidMass
, pwiz::identdata::Residue
, pwiz::util::MSIHandler::Record
- mass_
: ralab::base::resample::FTMSCompFunctor< TReal >
- massAnalyzerType
: pwiz::msdata::SpectrumInfo
- massDelta
: pwiz::identdata::SearchModification
- massDeviation
: pwiz::data::pepxml::Match
- massDiff
: pwiz::data::pepxml::AminoAcidModification
, pwiz::data::pepxml::SearchHit
- massNeutron
: pwiz::analysis::SpectrumList_ChargeFromIsotope
- massTable
: pwiz::identdata::SpectrumIdentificationProtocol
- massTablePtr
: pwiz::identdata::SpectrumIdentificationItem
- matches
: pwiz::data::pepxml::MatchData
- matchingTolerance
: pwiz::analysis::MS2Deisotoper::Config
, pwiz::analysis::PrecursorMassFilter::Config
, TestETDMassFilter
- max
: pwiz::analysis::RegionAnalyzer::SpectrumStats
- MAX_ID
: pwiz::data::Term
- max_num_items
: pwiz::util::mru_list< Item, KeyExtractor >
- maxCharge
: pwiz::analysis::MS2Deisotoper::Config
, pwiz::analysis::PeakelPicker_Basic::Config
, TestChargeStateCalculator
- maxCharge_
: pwiz::analysis::SpectrumList_ChargeFromIsotope
, pwiz::analysis::SpectrumList_ChargeStateCalculator
- maximumLength
: pwiz::proteome::Digestion::Config
- maximumMissedCleavages
: pwiz::proteome::Digestion::Config
- maxIntensity
: pwiz::data::peakdata::Peakel
- maxIsotopePeaks
: pwiz::analysis::SpectrumList_ChargeFromIsotope
- maxKnownCharge
: TestChargeStateCalculator
- maxKnownCharge_
: pwiz::analysis::SpectrumList_ChargeStateCalculator
- maxMultipleCharge
: TestChargeStateCalculator
- maxNumberPeaks
: pwiz::analysis::SpectrumList_ChargeFromIsotope
- maxnumbersofpeaks_
: ralab::base::ms::PeakPicker< TReal, TIntegrator >
- maxNumInternalCleavages
: pwiz::data::pepxml::EnzymaticSearchConstraint
- md
: TestModifiedPeptide
- mean
: pwiz::analysis::Noise
- mean_peak_mz
: pwiz::analysis::RegionAnalyzer::Stats
- measurePtr
: pwiz::identdata::FragmentArray
- median
: pwiz::util::MSIHandler::Record
- message
: pwiz::util::IterationListener::UpdateMessage
- midInitials
: pwiz::identdata::Person
- min_prob
: pwiz::data::pepxml::ErrorPoint
, pwiz::data::pepxml::PeptideProphetSummary
, pwiz::data::pepxml::RocDataPoint
- minCharge
: pwiz::analysis::MS2Deisotoper::Config
, pwiz::analysis::PeakelPicker_Basic::Config
, TestChargeStateCalculator
- minCharge_
: pwiz::analysis::SpectrumList_ChargeFromIsotope
, pwiz::analysis::SpectrumList_ChargeStateCalculator
- minDistance
: pwiz::identdata::Enzyme
- mine_
: pwiz::data::diff_impl::Same< object_type, config_type >
, pwiz::data::diff_impl::SameDeep< object_type, config_type >
- minimumLength
: pwiz::proteome::Digestion::Config
- minimumSpecificity
: pwiz::proteome::Digestion::Config
- minIsotopePeaks
: pwiz::analysis::SpectrumList_ChargeFromIsotope
- minMonoisotopicPeakelSize
: pwiz::analysis::PeakelPicker_Basic::Config
- minMultipleCharge
: TestChargeStateCalculator
- minNumberPeaks
: pwiz::analysis::SpectrumList_ChargeFromIsotope
- minNumTermini
: pwiz::data::pepxml::EnzymaticSearchConstraint
- minPeakelCount
: pwiz::analysis::PeakelPicker_Basic::Config
- minSnr_
: pwiz::analysis::CwtPeakDetector
- minSpace
: pwiz::data::pepxml::Specificity
- missedCleavages
: pwiz::identdata::Enzyme
- missedCleavages_
: pwiz::proteome::DigestedPeptide
- mixture_model
: pwiz::data::pepxml::PeptideProphetSummary
- modAminoAcidMass
: pwiz::data::pepxml::ModificationInfo
- mode_
: pwiz::analysis::SpectrumList_3D
, pwiz::analysis::SpectrumList_IonMobility
, pwiz::analysis::SpectrumList_PeakPicker
, pwiz::analysis::SpectrumList_ZeroSamplesFilter
, pwiz::msdata::MemoryMRUCache< PtrType, KeyExtractor >
, pwiz::proteome::ProteinListCache
- model_1_neg_distr
: pwiz::data::pepxml::DistributionPoint
- model_1_pos_distr
: pwiz::data::pepxml::DistributionPoint
- model_2_neg_distr
: pwiz::data::pepxml::DistributionPoint
- model_2_pos_distr
: pwiz::data::pepxml::DistributionPoint
- model_3_neg_distr
: pwiz::data::pepxml::DistributionPoint
- model_3_pos_distr
: pwiz::data::pepxml::DistributionPoint
- modification
: pwiz::identdata::Peptide
- modificationInfo
: pwiz::data::pepxml::SearchHit
- modificationParams
: pwiz::identdata::SpectrumIdentificationProtocol
- modifications
: pwiz::tradata::Peptide
- modifiedPeptide
: pwiz::data::pepxml::ModificationInfo
- mods
: TestModifiedPeptide
- modsHaveFormulas
: TestModifiedPeptide
- monoisotope
: pwiz::chemistry::Element::Info::Record
- monoisotopicFrequency
: pwiz::frequency::PeakDetectorMatchedFilter::Score
- monoisotopicIntensity
: pwiz::frequency::PeakDetectorMatchedFilter::Score
- monoisotopicMassDelta
: pwiz::identdata::Modification
, pwiz::identdata::SubstitutionModification
, pwiz::tradata::Modification
- monoisotopicPeakThresholdFactor
: pwiz::frequency::PeakDetectorMatchedFilter::Config
- monoMass
: TestAminoAcid
, TestFormula
, TestModifiedPeptide
- monoMassNeutral
: TestPeptide
- monoMassPlus1
: TestPeptide
- monoMassPlus2
: TestPeptide
- motif
: TestModification
- mp
: TestModifiedPeptide
- mr_zorg
: Fifth
- MS1retentionTimes
: pwiz::analysis::SpectrumList_ChargeFromIsotope
- MS1rTime
: TestChargeStateCalculator
- ms2cnt
: pwiz::analysis::SpectrumList_ScanSummer
- ms2RetentionTimes
: pwiz::analysis::SpectrumList_ScanSummer
- MS2rTime
: TestChargeStateCalculator
- msd
: pwiz::analysis::MSDataAnalyzer::DataInfo
- msd_
: pwiz::analysis::SpectrumList_TitleMaker
- msDetector
: pwiz::data::pepxml::MSMSPipelineAnalysis
, pwiz::data::pepxml::MSMSRunSummary
- msIonization
: pwiz::data::pepxml::MSMSPipelineAnalysis
, pwiz::data::pepxml::MSMSRunSummary
- msLevel
: pwiz::identdata::MassTable
, pwiz::msdata::SpectrumInfo
- msLevels
: pwiz::analysis::RunSummary::Config
- msLevelSet_
: pwiz::analysis::SpectrumList_FilterPredicate_MSLevelSet
- MSLevelsNone
: pwiz::msdata::SpectrumListBase
- msLevelsToFilter_
: pwiz::analysis::SpectrumList_ZeroSamplesFilter
- msLevelsToPeakPick_
: pwiz::analysis::SpectrumList_PeakPicker
- msLevelsToSmooth_
: pwiz::analysis::SpectrumList_Smoother
- msLevelsToThreshold
: pwiz::analysis::ThresholdFilter
- msManufacturer
: pwiz::data::pepxml::MSMSPipelineAnalysis
, pwiz::data::pepxml::MSMSRunSummary
- msMassAnalyzer
: pwiz::data::pepxml::MSMSPipelineAnalysis
, pwiz::data::pepxml::MSMSRunSummary
- msModel
: pwiz::data::pepxml::MSMSPipelineAnalysis
, pwiz::data::pepxml::MSMSRunSummary
- msmsRunSummary
: pwiz::data::pepxml::MSMSPipelineAnalysis
- mu_
: ralab::base::filter::utilities::Gauss< TReal >
, ralab::base::filter::utilities::Gauss_1deriv< TReal >
, ralab::base::filter::utilities::Mexican_Hat2< TReal >
, ralab::base::filter::utilities::Mexican_Hat< TReal >
- mz
: Goober
, pairData
, parentIon
, pwiz::analysis::PepxmlRecordReader::record
, pwiz::analysis::PrecursorRecalculator::PrecursorInfo
, pwiz::analysis::SpectrumList_PrecursorRefine::PrecursorInfo
, pwiz::data::peakdata::Feature
, pwiz::data::peakdata::Peak
, pwiz::data::peakdata::Peakel
, pwiz::msdata::MZIntensityPair
, pwiz::msdata::SpectrumInfo::PrecursorInfo
, pwiz::peptideid::PeptideID::Location
, pwiz::peptideid::PeptideID::Record
, pwiz::util::MSIHandler::Record
, RawMassDatum
, Simple
, TestDatum
- mzCenter
: pwiz::analysis::RegionSIC::Config
- mzHigh
: pwiz::msdata::SpectrumInfo
- mzHigh_
: pwiz::analysis::SpectrumList_MZWindow
- mzInitialEstimate
: TestInfo
- mzLeftWidth
: pwiz::analysis::PrecursorRecalculatorDefault::Config
- mzLow
: pwiz::msdata::SpectrumInfo
- mzLow_
: pwiz::analysis::SpectrumList_MZWindow
- mzMonoisotopic
: pwiz::data::peakdata::PeakFamily
- mzNegativeScans_
: pwiz::analysis::SpectrumList_LockmassRefiner
- mzPositiveScans_
: pwiz::analysis::SpectrumList_LockmassRefiner
- mzPvalue
: scoreChain
- mzRange
: pwiz::analysis::RegionAnalyzer::Config
, pwiz::analysis::RegionTIC::Config
- mzRank
: scoreChain
- mzRightWidth
: pwiz::analysis::PrecursorRecalculatorDefault::Config
- mzSet_
: pwiz::analysis::SpectrumList_FilterPredicate_MzPresent
- mzt_
: pwiz::analysis::SpectrumList_FilterPredicate_MzPresent
- mzTol
: pwiz::analysis::SpectrumList_ChargeFromIsotope
- mzTol_
: pwiz::analysis::CwtPeakDetector
- mzTolerance
: pwiz::analysis::PeakelGrower_Proximity::Config
, pwiz::analysis::PeakelPicker_Basic::Config
- mzTrue
: TestInfo
- mzVariance
: pwiz::data::peakdata::Peakel