ProteoWizard
Classes | Typedefs | Functions
pwiz::data::pepxml Namespace Reference

Classes

struct  AlternativeProtein
 
struct  AminoAcidModification
 
struct  AnalysisResult
 
struct  AnalysisSummary
 
struct  AnalysisTimestamp
 Reference for analysis applied to current run (time corresponds with analysis_summary/, id corresponds with analysis_result/) More...
 
struct  DataFilter
 
struct  DatasetDerivation
 Source and filtering criteria used to generate dataset. More...
 
struct  DistributionPoint
 
struct  EnzymaticSearchConstraint
 
struct  ErrorPoint
 
struct  Match
 
struct  MatchData
 
struct  MixtureModel
 
struct  ModAminoAcidMass
 
struct  ModificationInfo
 
struct  MSMSPipelineAnalysis
 
struct  MSMSRunSummary
 
struct  Parameter
 
struct  PeptideProphetResult
 
struct  PeptideProphetSummary
 
struct  Q3RatioResult
 
struct  RocDataPoint
 
struct  SampleEnzyme
 
struct  SearchDatabase
 
struct  SearchHit
 
struct  SearchResult
 
struct  SearchScore
 
struct  SearchSummary
 Database search settings. More...
 
struct  Specificity
 
struct  SpectrumQuery
 

Typedefs

typedef boost::shared_ptr< ParameterParameterPtr
 
typedef boost::shared_ptr< SearchScoreSearchScorePtr
 
typedef boost::shared_ptr< SearchHitSearchHitPtr
 
typedef boost::shared_ptr< SearchResultSearchResultPtr
 
typedef boost::shared_ptr< SearchSummarySearchSummaryPtr
 
typedef boost::shared_ptr< SpectrumQuerySpectrumQueryPtr
 
typedef boost::shared_ptr< AnalysisSummaryAnalysisSummaryPtr
 
typedef boost::shared_ptr< DataFilterDataFilterPtr
 
typedef boost::shared_ptr< DatasetDerivationDatasetDerivationPtr
 
typedef boost::shared_ptr< MatchMatchPtr
 

Functions

void setLogStream (std::ostream &os)
 
PWIZ_API_DECL bool operator== (const SearchHitPtr left, const SearchHitPtr right)
 
PWIZ_API_DECL bool operator== (SearchResultPtr left, SearchResultPtr right)
 
PWIZ_API_DECL bool operator== (const SearchSummaryPtr left, const SearchSummaryPtr right)
 
PWIZ_API_DECL bool operator== (const SpectrumQueryPtr left, const SpectrumQueryPtr right)
 
PWIZ_API_DECL bool operator== (const MatchPtr left, const MatchPtr right)
 

Typedef Documentation

§ ParameterPtr

typedef boost::shared_ptr<Parameter> pwiz::data::pepxml::ParameterPtr

Definition at line 310 of file MinimumPepXML.hpp.

§ SearchScorePtr

typedef boost::shared_ptr<SearchScore> pwiz::data::pepxml::SearchScorePtr

Definition at line 324 of file MinimumPepXML.hpp.

§ SearchHitPtr

typedef boost::shared_ptr<SearchHit> pwiz::data::pepxml::SearchHitPtr

Definition at line 359 of file MinimumPepXML.hpp.

§ SearchResultPtr

Definition at line 381 of file MinimumPepXML.hpp.

§ SearchSummaryPtr

Definition at line 464 of file MinimumPepXML.hpp.

§ SpectrumQueryPtr

Definition at line 520 of file MinimumPepXML.hpp.

§ AnalysisSummaryPtr

Definition at line 567 of file MinimumPepXML.hpp.

§ DataFilterPtr

typedef boost::shared_ptr<DataFilter> pwiz::data::pepxml::DataFilterPtr

Definition at line 583 of file MinimumPepXML.hpp.

§ DatasetDerivationPtr

Definition at line 595 of file MinimumPepXML.hpp.

§ MatchPtr

typedef boost::shared_ptr<Match> pwiz::data::pepxml::MatchPtr

Definition at line 668 of file MinimumPepXML.hpp.

Function Documentation

§ setLogStream()

void pwiz::data::pepxml::setLogStream ( std::ostream &  os)

§ operator==() [1/5]

PWIZ_API_DECL bool pwiz::data::pepxml::operator== ( const SearchHitPtr  left,
const SearchHitPtr  right 
)

§ operator==() [2/5]

PWIZ_API_DECL bool pwiz::data::pepxml::operator== ( SearchResultPtr  left,
SearchResultPtr  right 
)

§ operator==() [3/5]

PWIZ_API_DECL bool pwiz::data::pepxml::operator== ( const SearchSummaryPtr  left,
const SearchSummaryPtr  right 
)

§ operator==() [4/5]

PWIZ_API_DECL bool pwiz::data::pepxml::operator== ( const SpectrumQueryPtr  left,
const SpectrumQueryPtr  right 
)

§ operator==() [5/5]

PWIZ_API_DECL bool pwiz::data::pepxml::operator== ( const MatchPtr  left,
const MatchPtr  right 
)