ProteoWizard
Classes | Namespaces | Variables
Digestion.hpp File Reference
#include "pwiz/utility/misc/Export.hpp"
#include "pwiz/data/common/cv.hpp"
#include "pwiz/utility/chemistry/Chemistry.hpp"
#include "Peptide.hpp"
#include "boost/shared_ptr.hpp"
#include <string>
#include <limits>
#include <set>

Go to the source code of this file.

Classes

class  pwiz::proteome::DigestedPeptide
 peptide subclass that contains extra metadata provided by digestion More...
 
class  pwiz::proteome::Digestion
 enumerates the peptides from proteolytic digestion of a polypeptide or protein; More...
 
struct  pwiz::proteome::Digestion::Config
 sets constraints for valid peptides produced by iterating the digestion More...
 
class  pwiz::proteome::Digestion::const_iterator
 provides forward-only, read-only iteration to enumerate peptides More...
 

Namespaces

 pwiz
 
 pwiz::proteome
 

Variables

 NonSpecific = 0
 
 SemiSpecific = 1
 neither termini must match digestion motif(s) More...
 

Variable Documentation

§ NonSpecific

NonSpecific = 0

Definition at line 119 of file Digestion.hpp.

Referenced by testBSADigestion(), testFind(), and testSerialize().

§ SemiSpecific

SemiSpecific = 1

neither termini must match digestion motif(s)

Definition at line 120 of file Digestion.hpp.

Referenced by testBSADigestion(), testEnzyme(), testFind(), and testSerialize().