APBS
1.4.1
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dependencies | |
Vcsm class | A charge-simplex map for evaluating integrals of delta functions in a finite element setting |
Vfetk class | FEtk master class (interface between FEtk and APBS) |
Vpee class | This class provides some functionality for error esimation in parallel |
APOLparm class | Parameter structure for APOL-specific variables from input files |
FEMparm class | Parameter structure for FEM-specific variables from input files |
MGparm class | Parameter which holds useful parameters for generic multigrid calculations |
NOsh class | Class for parsing for fixed format input files |
PBEparm class | Parameter structure for PBE variables independent of solver |
Vacc class | Solvent- and ion-accessibility oracle |
Valist class | Container class for list of atom objects |
Vatom class | Atom class for interfacing APBS with PDB files |
Vcap class | Collection of routines which cap certain exponential and hyperbolic functions |
Vclist class | Atom cell list |
Vgreen class | Provides capabilities for pointwise evaluation of free space Green's function for point charges in a uniform dielectric |
Vhal class | A "class" which consists solely of macro definitions which are used by several other classes |
Matrix wrapper class | A header for including data wrapping matrices |
Vparam class | Reads and assigns charge/radii parameters |
Vpbe class | The Poisson-Boltzmann master class |
Vstring class | Provides a collection of useful non-ANSI string functions |
Vunit class | Collection of constants and conversion factors |
Vgrid class | Oracle for Cartesian mesh data |
Vmgrid class | Oracle for Cartesian mesh data |
Vopot class | Potential oracle for Cartesian mesh data |
Vpmg class | A wrapper for Mike Holst's PMG multigrid code |
Vpmgp class | Parameter structure for Mike Holst's PMGP code |
C translation of Holst group PMG code | C translation of Holst group PMG code |
High-level front-end routines |